Add fix for build dependecies

Moved mysql and dgbuilder under common (built first)
to ensure they are built before appc and sdnc charts
that depend on them.

Change-Id: I2fc28f0537b2639bd2b761c6f115544965a228b1
Issue-ID: OOM-830
Signed-off-by: Mike Elliott <mike.elliott@amdocs.com>

8 files changed, 472 insertions, 0 deletions

diff --git a/kubernetes/common/mysql/templates/configmap.yaml b/kubernetes/common/mysql/templates/configmap.yaml
new file mode 100644
index 0000000000..dd2b5b7db2
--- /dev/null
+++ b/kubernetes/common/mysql/templates/configmap.yaml
@@ -0,0 +1,18 @@
+apiVersion: v1
+kind: ConfigMap
+metadata:
+  name: {{ include "common.fullname" . }}-db-configmap
+  namespace: {{ include "common.namespace" . }}
+data:
+  master.cnf: |
+    # Apply this config only on the master.
+    [mysqld]
+    log-bin
+    [localpathprefix]
+    master
+  slave.cnf: |
+    # Apply this config only on slaves.
+    [mysqld]
+    super-read-only
+    [localpathprefix]
+    slave
diff --git a/kubernetes/common/mysql/templates/nfs-provisoner.yaml b/kubernetes/common/mysql/templates/nfs-provisoner.yaml
new file mode 100644
index 0000000000..478224e1a1
--- /dev/null
+++ b/kubernetes/common/mysql/templates/nfs-provisoner.yaml
@@ -0,0 +1,62 @@
+#{{ if not .Values.disableNfsProvisioner }}
+apiVersion: extensions/v1beta1
+kind: Deployment
+metadata:
+  name: {{ .Values.nfsprovisionerPrefix }}-nfs-provisioner
+  namespace: {{ include "common.namespace" . }}
+  labels:
+    app: {{ include "common.name" . }}
+    chart: {{ .Chart.Name }}-{{ .Chart.Version | replace "+" "_" }}
+    release: {{ .Release.Name }}
+    heritage: {{ .Release.Service }}
+spec:
+  #replicas: {{ .Values.replicaCount }}
+  strategy:
+    type: Recreate
+  template:
+    metadata:
+      labels:
+        app: {{ .Values.nfsprovisionerPrefix }}-nfs-provisioner
+        release: {{ .Release.Name }}
+    spec:
+      containers:
+        - name: {{ .Values.nfsprovisionerPrefix }}-nfs-provisioner
+          image: "{{ .Values.global.nfsprovisionerRepository | default .Values.nfsprovisionerRepository }}/{{ .Values.nfsprovisionerImage }}"
+          imagePullPolicy: {{ .Values.global.pullPolicy | default .Values.pullPolicy }}
+          ports:
+            - name: nfs
+              containerPort: {{ .Values.service.nfsPort }}
+            - name: mountd
+              containerPort: {{ .Values.service.mountdPort }}
+            - name: rpcbind
+              containerPort: {{ .Values.service.rpcbindPort }}
+            - name: rpcbind-udp
+              containerPort: {{ .Values.service.rpcbindUdpPort }}
+              protocol: UDP
+          securityContext:
+            capabilities:
+              add:
+                - DAC_READ_SEARCH
+                - SYS_RESOURCE
+          args:
+            - "-provisioner={{ include "common.fullname" . }}/nfs"
+          env:
+            - name: POD_IP
+              valueFrom:
+                fieldRef:
+                  fieldPath: status.podIP
+            - name: SERVICE_NAME
+              value: {{ .Values.nfsprovisionerPrefix }}-nfs-provisioner
+            - name: POD_NAMESPACE
+              valueFrom:
+                fieldRef:
+                  fieldPath: metadata.namespace
+          imagePullPolicy: {{ .Values.global.pullPolicy | default .Values.pullPolicy }}
+          volumeMounts:
+            - name: export-volume
+              mountPath: /export
+      volumes:
+        - name: export-volume
+          hostPath:
+            path: {{ .Values.global.persistence.mountPath | default .Values.persistence.mountPath }}/{{ .Release.Namespace }}/{{ .Values.persistence.mountSubPath }}
+#{{ end }}
diff --git a/kubernetes/common/mysql/templates/pv.yaml b/kubernetes/common/mysql/templates/pv.yaml
new file mode 100644
index 0000000000..ba128b95d0
--- /dev/null
+++ b/kubernetes/common/mysql/templates/pv.yaml
@@ -0,0 +1,22 @@
+{{- if and .Values.persistence.enabled (not .Values.persistence.existingClaim) -}}
+kind: PersistentVolume
+apiVersion: v1
+metadata:
+  name: {{ include "common.fullname" . }}-data
+  namespace: {{ include "common.namespace" . }}
+  labels:
+    app: {{ include "common.name" . }}
+    chart: "{{ .Chart.Name }}-{{ .Chart.Version | replace "+" "_" }}"
+    release: "{{ .Release.Name }}"
+    heritage: "{{ .Release.Service }}"
+    name: {{ include "common.fullname" . }}
+spec:
+  capacity:
+    storage: {{ .Values.persistence.size}}
+  accessModes:
+    - {{ .Values.persistence.accessMode }}
+  storageClassName: "{{ include "common.fullname" . }}-data"
+  persistentVolumeReclaimPolicy: {{ .Values.persistence.volumeReclaimPolicy }}
+  hostPath:
+    path: {{ .Values.global.persistence.mountPath | default .Values.persistence.mountPath }}/{{ .Release.Namespace }}/{{ .Values.persistence.mountSubPath }}
+{{- end -}}
diff --git a/kubernetes/common/mysql/templates/pvc.yaml b/kubernetes/common/mysql/templates/pvc.yaml
new file mode 100644
index 0000000000..a2949fef36
--- /dev/null
+++ b/kubernetes/common/mysql/templates/pvc.yaml
@@ -0,0 +1,23 @@
+{{- if and .Values.persistence.enabled (not .Values.persistence.existingClaim) -}}
+kind: PersistentVolumeClaim
+apiVersion: v1
+metadata:
+  name: {{ include "common.fullname" . }}-data
+  namespace: {{ include "common.namespace" . }}
+  labels:
+    app: {{ include "common.fullname" . }}
+    chart: "{{ .Chart.Name }}-{{ .Chart.Version }}"
+    release: "{{ .Release.Name }}"
+    heritage: "{{ .Release.Service }}"
+{{- if .Values.persistence.annotations }}
+  annotations:
+{{ toYaml .Values.persistence.annotations | indent 4 }}
+{{- end }}
+spec:
+  accessModes:
+    - {{ .Values.persistence.accessMode }}
+  resources:
+    requests:
+      storage: {{ .Values.persistence.size }}
+  storageClassName: "{{ include "common.fullname" . }}-data"
+{{- end -}}
\ No newline at end of file
diff --git a/kubernetes/common/mysql/templates/secrets.yaml b/kubernetes/common/mysql/templates/secrets.yaml
new file mode 100644
index 0000000000..7604be8239
--- /dev/null
+++ b/kubernetes/common/mysql/templates/secrets.yaml
@@ -0,0 +1,13 @@
+apiVersion: v1
+kind: Secret
+metadata:
+  name: {{ include "common.fullname" . }}
+  namespace: {{ include "common.namespace" . }}
+  labels:
+    app: {{ include "common.fullname" . }}
+    chart: {{ .Chart.Name }}-{{ .Chart.Version | replace "+" "_" }}
+    release: {{ .Release.Name }}
+    heritage: {{ .Release.Service }}
+type: Opaque
+data:
+  db-root-password: {{ .Values.config.dbRootPassword | b64enc | quote }}
\ No newline at end of file
diff --git a/kubernetes/common/mysql/templates/service.yaml b/kubernetes/common/mysql/templates/service.yaml
new file mode 100644
index 0000000000..c6a28c4605
--- /dev/null
+++ b/kubernetes/common/mysql/templates/service.yaml
@@ -0,0 +1,90 @@
+apiVersion: v1
+kind: Service
+metadata:
+  name: {{ .Values.service.name }}
+  namespace: {{ include "common.namespace" . }}
+  labels:
+    app: {{ include "common.name" . }}
+    chart: {{ .Chart.Name }}-{{ .Chart.Version | replace "+" "_" }}
+    release: {{ .Release.Name }}
+    heritage: {{ .Release.Service }}
+spec:
+  ports:
+    - port: {{ .Values.service.internalPort }}
+      name: {{ .Values.service.name }}
+  selector:
+    app: {{ include "common.name" . }}
+    release: {{ .Release.Name }}
+  clusterIP: None
+#{{ if not .Values.disableNfsProvisioner }}
+---
+kind: Service
+apiVersion: v1
+metadata:
+  name: {{ .Values.nfsprovisionerPrefix }}-nfs-provisioner
+  namespace: {{ include "common.namespace" . }}
+  labels:
+    app: {{ .Values.nfsprovisionerPrefix }}-nfs-provisioner
+spec:
+  ports:
+    - name: nfs
+      port: {{ .Values.service.nfsPort }}
+    - name: mountd
+      port: {{ .Values.service.mountdPort }}
+    - name: rpcbind
+      port: {{ .Values.service.rpcbindPort }}
+    - name: rpcbind-udp
+      port: {{ .Values.service.rpcbindUdpPort }}
+      protocol: UDP
+  selector:
+    app: {{ .Values.nfsprovisionerPrefix }}-nfs-provisioner
+#{{ end }}
+---
+# Client service for connecting to any MySQL instance for reads.
+# Only master: sdnc-dbhost-0 accepts the write request.
+apiVersion: v1
+kind: Service
+metadata:
+  name: {{ .Values.service.name }}-read
+  namespace: {{ include "common.namespace" . }}
+  labels:
+    app: {{ include "common.name" . }}
+spec:
+  ports:
+    - port: {{ .Values.service.internalPort }}
+      name: {{ .Values.service.name }}
+  selector:
+    app: {{ include "common.name" . }}
+    release: {{ .Release.Name }}
+---
+apiVersion: v1
+kind: Service
+metadata:
+  name: {{ .Values.sdnctlPrefix }}-sdnctldb01
+  namespace: {{ include "common.namespace" . }}
+  labels:
+    app: {{ include "common.name" . }}
+spec:
+  ports:
+    - port: {{ .Values.service.internalPort }}
+      name: {{ .Values.service.name }}
+  selector:
+    app: {{ include "common.name" . }}
+    release: {{ .Release.Name }}
+  clusterIP: None
+---
+apiVersion: v1
+kind: Service
+metadata:
+  name: {{ .Values.sdnctlPrefix }}-sdnctldb02
+  namespace: {{ include "common.namespace" . }}
+  labels:
+    app: {{ include "common.name" . }}
+spec:
+  ports:
+    - port: {{ .Values.service.internalPort }}
+      name: {{ .Values.service.name }}
+  selector:
+    app: {{ include "common.name" . }}
+    release: {{ .Release.Name }}
+  clusterIP: None
diff --git a/kubernetes/common/mysql/templates/statefulset.yaml b/kubernetes/common/mysql/templates/statefulset.yaml
new file mode 100644
index 0000000000..7b55bf2be0
--- /dev/null
+++ b/kubernetes/common/mysql/templates/statefulset.yaml
@@ -0,0 +1,238 @@
+apiVersion: apps/v1beta1
+kind: StatefulSet
+metadata:
+  name: {{ include "common.fullname" . }}
+  namespace: {{ include "common.namespace" . }}
+  labels:
+    app: {{ include "common.name" . }}
+    chart: {{ .Chart.Name }}-{{ .Chart.Version | replace "+" "_" }}
+    release: {{ .Release.Name }}
+    heritage: {{ .Release.Service }}
+spec:
+  serviceName: {{ .Values.service.name }}
+  replicas: {{ .Values.replicaCount }}
+  template:
+    metadata:
+      labels:
+        app: {{ include "common.name" . }}
+        release: {{ .Release.Name }}
+    spec:
+      initContainers:
+#{{ if not .Values.disableNfsProvisioner }}
+      - name: {{ include "common.name" . }}-readiness
+        command:
+        - /root/ready.py
+        args:
+        - --container-name
+        - {{ .Values.nfsprovisionerPrefix }}-nfs-provisioner
+        env:
+        - name: NAMESPACE
+          valueFrom:
+            fieldRef:
+              apiVersion: v1
+              fieldPath: metadata.namespace
+        image: "{{ .Values.global.readinessRepository }}/{{ .Values.global.readinessImage }}"
+        imagePullPolicy: {{ .Values.global.pullPolicy | default .Values.pullPolicy }}
+#{{ end }}
+      - name: init-mysql
+        image: "{{ .Values.repository | default .Values.repository }}/{{ .Values.image }}"
+        imagePullPolicy: {{ .Values.global.pullPolicy | default .Values.pullPolicy }}
+        command:
+        - bash
+        - "-c"
+        - |
+          set -ex
+          # Generate mysql server-id from pod ordinal index.
+          [[ `hostname` =~ -([0-9]+)$ ]] || exit 1
+          ordinal=${BASH_REMATCH[1]}
+          echo BASH_REMATCH=${BASH_REMATCH}
+          echo [mysqld] > /mnt/conf.d/server-id.cnf
+          # Add an offset to avoid reserved server-id=0 value.
+          echo server-id=$((100 + $ordinal)) >> /mnt/conf.d/server-id.cnf
+          # Copy appropriate conf.d files from config-map to emptyDir.
+          if [[ $ordinal -eq 0 ]]; then
+            cp /mnt/config-map/master.cnf /mnt/conf.d/
+          else
+            cp /mnt/config-map/slave.cnf /mnt/conf.d/
+          fi
+        volumeMounts:
+        - name: conf
+          mountPath: /mnt/conf.d
+        - name: config-map
+          mountPath: /mnt/config-map
+
+      - name: clone-mysql
+        image: "{{ .Values.global.xtrabackupRepository | default .Values.xtrabackupRepository }}/{{ .Values.xtrabackupImage }}"
+        imagePullPolicy: {{ .Values.global.pullPolicy | default .Values.pullPolicy }}
+        env:
+          - name: MYSQL_ROOT_PASSWORD
+            valueFrom:
+              secretKeyRef:
+                name: {{ template "common.fullname" . }}
+                key: db-root-password
+        command:
+        - bash
+        - "-c"
+        - |
+          set -ex
+          # Skip the clone if data already exists.
+          [[ -d /var/lib/mysql/mysql ]] && exit 0
+          # Skip the clone on master (ordinal index 0).
+          [[ `hostname` =~ -([0-9]+)$ ]] || exit 1
+          ordinal=${BASH_REMATCH[1]}
+          echo ${BASH_REMATCH}
+          [[ $ordinal -eq 0 ]] && exit 0
+          # Clone data from previous peer.
+          ncat --recv-only {{ template "common.name" . }}-$(($ordinal-1)).{{ .Values.service.name }}.{{ include "common.namespace" . }} 3307 | xbstream -x -C /var/lib/mysql
+          # Prepare the backup.
+          xtrabackup --user=root --password=$MYSQL_ROOT_PASSWORD --prepare --target-dir=/var/lib/mysql
+          ls -l /var/lib/mysql
+        volumeMounts:
+        - name: {{ include "common.fullname" . }}-data
+          mountPath: /var/lib/mysql
+          subPath: mysql
+        - name: conf
+          mountPath: /etc/mysql/conf.d
+          
+      containers:
+        #sdnc-db-container
+        - name: {{ include "common.name" . }}
+          image: "{{ .Values.repository | default .Values.repository }}/{{ .Values.image }}"
+          imagePullPolicy: {{ .Values.global.pullPolicy | default .Values.pullPolicy }}
+          ports:
+          - containerPort: {{ .Values.service.internalPort }}
+          # disable liveness probe when breakpoints set in debugger
+          # so K8s doesn't restart unresponsive container
+          {{- if eq .Values.liveness.enabled true }}
+          livenessProbe:
+            exec:
+              command: ["mysqladmin", "ping"]
+            initialDelaySeconds: {{ .Values.liveness.initialDelaySeconds }}
+            periodSeconds: {{ .Values.liveness.periodSeconds }}
+            timeoutSeconds: {{ .Values.liveness.timeoutSeconds }}
+          {{end -}}
+          readinessProbe:
+            tcpSocket:
+              port: {{ .Values.service.internalPort }}
+            initialDelaySeconds: {{ .Values.readiness.initialDelaySeconds }}
+            periodSeconds: {{ .Values.readiness.periodSeconds }}
+          env:
+            - name: MYSQL_ROOT_PASSWORD
+              valueFrom:
+                secretKeyRef:
+                  name: {{ template "common.fullname" . }}
+                  key: db-root-password
+            - name: MYSQL_ROOT_HOST
+              value: '%'
+            - name: MYSQL_ALLOW_EMPTY_PASSWORD
+              value: {{ .Values.config.dbAllowEmptyPassword | default "0" | quote }}
+          volumeMounts:
+          - mountPath: /var/lib/mysql
+            name: {{ include "common.fullname" . }}-data
+            subPath: mysql
+          - mountPath: /etc/mysql/conf.d
+            name: conf
+          resources:
+{{ toYaml .Values.resources | indent 12 }}
+        {{- if .Values.nodeSelector }}
+        nodeSelector:
+{{ toYaml .Values.nodeSelector | indent 10 }}
+        {{- end -}}
+        {{- if .Values.affinity }}
+        affinity:
+{{ toYaml .Values.affinity | indent 10 }}
+        {{- end }}
+
+        - name: xtrabackup
+          image: "{{ .Values.global.xtrabackupRepository | default .Values.xtrabackupRepository }}/{{ .Values.xtrabackupImage }}"
+          imagePullPolicy: {{ .Values.global.pullPolicy | default .Values.pullPolicy }}
+          env:
+            - name: MYSQL_ROOT_PASSWORD
+              valueFrom:
+                secretKeyRef:
+                  name: {{ template "common.fullname" . }}
+                  key: db-root-password
+          ports:
+          - containerPort: {{ .Values.xtrabackup.internalPort }}
+            name: xtrabackup
+          command:
+          - bash
+          - "-c"
+          - |
+            set -ex
+            cd /var/lib/mysql
+            ls -l
+            # Determine binlog position of cloned data, if any.
+            if [[ -f xtrabackup_slave_info ]]; then
+              echo "Inside xtrabackup_slave_info"
+              # XtraBackup already generated a partial "CHANGE MASTER TO" query
+              # because we're cloning from an existing slave.
+              mv xtrabackup_slave_info change_master_to.sql.in
+              # Ignore xtrabackup_binlog_info in this case (it's useless).
+              rm -f xtrabackup_binlog_info
+            elif [[ -f xtrabackup_binlog_info ]]; then
+              echo "Inside xtrabackup_binlog_info"
+              # We're cloning directly from master. Parse binlog position.
+              [[ `cat xtrabackup_binlog_info` =~ ^(.*?)[[:space:]]+(.*?)$ ]] || exit 1
+              rm xtrabackup_binlog_info
+              echo "CHANGE MASTER TO MASTER_LOG_FILE='${BASH_REMATCH[1]}',\
+                    MASTER_LOG_POS=${BASH_REMATCH[2]}" > change_master_to.sql.in
+            fi
+
+            # Check if we need to complete a clone by starting replication.
+            if [[ -f change_master_to.sql.in ]]; then
+              echo "Waiting for mysqld to be ready (accepting connections)"
+              [[ `hostname` =~ -([0-9]+)$ ]] || exit 1
+              ordinal=${BASH_REMATCH[1]}
+              echo $ordinal
+              until mysql --user=root --password=$MYSQL_ROOT_PASSWORD -h localhost -e "SELECT 1"; do sleep 1; done
+
+              echo "Initializing replication from clone position"
+              # In case of container restart, attempt this at-most-once.
+              mv change_master_to.sql.in change_master_to.sql.orig
+              mysql --user=root --password=$MYSQL_ROOT_PASSWORD -h localhost <<EOF
+            $(<change_master_to.sql.orig),
+              MASTER_HOST="{{ template "common.name" . }}-0.{{ .Values.service.name }}.{{ include "common.namespace" . }}",
+              MASTER_USER="root",
+              MASTER_PASSWORD="$MYSQL_ROOT_PASSWORD",
+              MASTER_CONNECT_RETRY=10;
+            START SLAVE;
+            EOF
+            fi
+
+            # Start a server to send backups when requested by peers.
+            exec ncat --listen --keep-open --send-only --max-conns=1 3307 -c \
+              "xtrabackup --user=root --password=$MYSQL_ROOT_PASSWORD --backup --slave-info --stream=xbstream --host=localhost"
+          volumeMounts:
+          - name: {{ include "common.fullname" . }}-data
+            mountPath: /var/lib/mysql
+            subPath: mysql
+          - name: conf
+            mountPath: /etc/mysql/conf.d
+      volumes:
+      - name: conf
+        emptyDir: {}
+      - name: config-map
+        configMap:
+          name: {{ include "common.fullname" . }}-db-configmap
+      - name: localtime
+        hostPath:
+          path: /etc/localtime
+      - name: {{ include "common.fullname" . }}-data
+#{{ if not .Values.disableNfsProvisioner }}
+  volumeClaimTemplates:
+  - metadata:
+      name: {{ include "common.fullname" . }}-data
+      annotations:
+        volume.beta.kubernetes.io/storage-class: "{{ include "common.fullname" . }}-data"
+    spec:
+      accessModes: ["ReadWriteMany"]
+      resources:
+        requests:
+          storage: 1Gi
+#{{ else if .Values.persistence.enabled }}
+        persistentVolumeClaim:
+          claimName: {{ include "common.fullname" . }}-data
+#{{ else }}
+        emptyDir: {}
+#{{ end }}
diff --git a/kubernetes/common/mysql/templates/storageclass.yaml b/kubernetes/common/mysql/templates/storageclass.yaml
new file mode 100644
index 0000000000..1a4e6b6bb7
--- /dev/null
+++ b/kubernetes/common/mysql/templates/storageclass.yaml
@@ -0,0 +1,6 @@
+kind: StorageClass
+apiVersion: storage.k8s.io/v1
+metadata:
+  name: "{{ include "common.fullname" . }}-data"
+  namespace: {{ include "common.namespace" . }}
+provisioner: {{ include "common.fullname" . }}/nfs